Talk to your vet and explain you are concerned about the stress and trying to settle her in so she can eat. However, if there's any concern at all don't miss a vet visit or a follow-up. It's such a fine line in not wanting to stress the snake but yet not missing a sign that the RI isn't fully gone. Only you and your vet can make this call I think.

Just whenever it's all done with her being hauled about and fussed with, start the "quiet time" clock then and give the snake some time to just de-stress before you try to feed. Trying too often to feed when the snake isn't ready can have the effect of triggering the refusal which is what your trying to avoid in the first place.