I take them out of the incubator after they have come out of the egg. I used 6 qt shoe boxes in the incubator 6 quart shoe boxes in my hatchling rack. I keep up to 3 hatchlings in a 6 qt shoe box with paper towel substrate, a water bowl, and a hide until they have had their first shed. After their first shed, I move them each into their own 6 qt shoe box. As for the other 2 eggs, I would suggest cutting the eggs open. I waited for the first egg to pip in a clutch, then cut all the other eggs in that clutch open (with the exception of my first clutch and my 9th clutch, I was too impatient and cut them on day 50). Out of all my clutches, I did not loose any by cutting them (the only one I lost was in clutch #4, due to a twisted umbilical chord, it was dead by the time the first egg in that clutch pipped). So if you are on day 61, you should be fine to cut the eggs open. The hatchlings will most likely stick their heads out of the eggs within a day or 2 of you cutting the eggs.