Welcome to the site!
Feeding in the snakes cage is the way to go. There aren't any negative effects associated with feeding in the snakes cage.
Either way is fine, I would give frozen another shot.
Checkout these threads if you haven't already
http://ball-pythons.net/forums/showt...ius)-Caresheet
http://ball-pythons.net/forums/showt...t-Thermometers