No it shouldn't matter.

Mitch-the exotics specialist part. NO VET in my area that DOESN'T see reptiles will do a fecal on one. It's funny to me, they just won't.

You can try calling around if you'd like, but why not just take the fecal to a reptile vet who knows just what to look for, as well as have the right information on hand for dosing for your certain species?